Technical reports and protocols--request a pdf
Huffard C.L., J. Wilson, C. Hitipeuw, C. Rotinsulu, S. Mangubhai, M.V. Erdmann, W. Adnyana, P. Barber, J. Manuputty, M. Mongdong, G. Purba, K. Rhodes, & H. Toha (2012) Ecosystem based management in the Bird’s Head Seascape: turning science into action. Ecosystem Based Management Program: Conservation International, The Nature Conservancy, and World Wildlife Fund Indonesia. 40 pages. Bahasa Indonesia pdf English pdf
Huffard, C.L. (2012) Monitoring protocols for marine-protected area-specific needs in Raja Ampat, Indonesia. Conservation International Indonesia, 31 pages (In Bahasa Indonesia).
Lazuardi, M.E., R. Mambrasar, E. Mambraku, S. Mayor, Defy Pada, C.L. Huffard, E. Montague, B. Robison, & M.V. Erdmann (2011) Conservation value of East Waigeo. Conservation International. 9 pages.
Stone, G., C.L. Huffard, M.V. Erdmann, E. Montague, B. Robison & R. Rotjan (2011) Seamount Expedition in Raja Ampat, West Papua, Indonesia: A trip report of science activities. 19 pages.
Lazuardi, M.E., C.L. Huffard, & K. Tjandra (2010). Community perceptions in the Raja Ampat Regency, Indonesia. (In Bahasa Indonesia) Conservation International Indonesia. 76 pages.
Huffard, C.L. (2010) A lobster monitoring protocol for community members of marine protected areas in Raja Ampat, Papua. Conservation International Indonesia.
Huffard, C.L., M.V. Erdmann & T. Gunawan (2009) Defining geographic priorities for marine biodiversity conservation in Indonesia. Based on data inputs from G. Allen, P. Barber, S. Campbell, L. Devantier, M.V. Erdmann, M. Halim, T. Hitipeuw, Guswindia, B. Hoeksema, M. Hutomo, B. Kahn, Y. Noor, M.K. Moosa, K. S. Putra, Suharsono, E. Turak, J. Randall, R. Salm, C. Veron, C. Wallace, 103 pp. Bahasa Indonesia pdf English pdf
Huffard, C.L. (2009) Aerial monitoring protocol for the Drifter Experimental Ultralight, Raja Ampat, Papua. Conservation International Indonesia.
Bertrand, J.F. & C.L. Huffard (2004) Report on the coral reef community survey conducted 1 year after the installation of Ecoreefs ceramic modules. A monitoring report.
Huffard, C.L., M.V. Erdmann, & M. Moore (2004) The economic and conservation benefits of coral reef rehabilitation: baseline study of bombed reef in Bunaken National Park, Indonesia. A monitoring report.
Fox, H. & C.L. Huffard (2002) Enhancing Reef Recovery in Komodo National Park, Indonesia: Coral Reef Rehabilitation at Ecologically Significant Scales Interim Report: Project Installation.
Huffard, C.L. (2012) Monitoring protocols for marine-protected area-specific needs in Raja Ampat, Indonesia. Conservation International Indonesia, 31 pages (In Bahasa Indonesia).
Lazuardi, M.E., R. Mambrasar, E. Mambraku, S. Mayor, Defy Pada, C.L. Huffard, E. Montague, B. Robison, & M.V. Erdmann (2011) Conservation value of East Waigeo. Conservation International. 9 pages.
Stone, G., C.L. Huffard, M.V. Erdmann, E. Montague, B. Robison & R. Rotjan (2011) Seamount Expedition in Raja Ampat, West Papua, Indonesia: A trip report of science activities. 19 pages.
Lazuardi, M.E., C.L. Huffard, & K. Tjandra (2010). Community perceptions in the Raja Ampat Regency, Indonesia. (In Bahasa Indonesia) Conservation International Indonesia. 76 pages.
Huffard, C.L. (2010) A lobster monitoring protocol for community members of marine protected areas in Raja Ampat, Papua. Conservation International Indonesia.
Huffard, C.L., M.V. Erdmann & T. Gunawan (2009) Defining geographic priorities for marine biodiversity conservation in Indonesia. Based on data inputs from G. Allen, P. Barber, S. Campbell, L. Devantier, M.V. Erdmann, M. Halim, T. Hitipeuw, Guswindia, B. Hoeksema, M. Hutomo, B. Kahn, Y. Noor, M.K. Moosa, K. S. Putra, Suharsono, E. Turak, J. Randall, R. Salm, C. Veron, C. Wallace, 103 pp. Bahasa Indonesia pdf English pdf
Huffard, C.L. (2009) Aerial monitoring protocol for the Drifter Experimental Ultralight, Raja Ampat, Papua. Conservation International Indonesia.
Bertrand, J.F. & C.L. Huffard (2004) Report on the coral reef community survey conducted 1 year after the installation of Ecoreefs ceramic modules. A monitoring report.
Huffard, C.L., M.V. Erdmann, & M. Moore (2004) The economic and conservation benefits of coral reef rehabilitation: baseline study of bombed reef in Bunaken National Park, Indonesia. A monitoring report.
Fox, H. & C.L. Huffard (2002) Enhancing Reef Recovery in Komodo National Park, Indonesia: Coral Reef Rehabilitation at Ecologically Significant Scales Interim Report: Project Installation.
Peer-reviewed publications--Full Google Scholar Profile (most op to date)
*Student or intern
Miguez-Salas, O. C. L. Huffard, K. L. Smith Jr., P. McGill, F.J. Rodríguez-Tovar. (2020) Faunal assemblage changes, bioturbation and benthic storms at an abyssal station in the northeastern Pacific. Deep-Sea Research I: Oceanographic Research Papers. 160: 103277. doi: 10.1016/j.dsr.2020.103277
Huffard C. L., C. A. Durkin, S. E. Wilson, P. McGill, Rich Henthorn, K. L. Smith Jr. (2020) Temporally-resolved mechanisms of deep-ocean particle flux and impact on the seafloor carbon cycle in the northeast Pacific. Deep-Sea Research II. 173: 104763. doi: 10.1016/j.dsr2.2020.104763 free from publisher
Shaw, T., C. Boucher, K.L. Smith Jr, C.L. Huffard. (2020) Model study of oxygen mass transfer into persistent aggregate layers in the deep sea Deep-Sea Research II. 173: 104760. doi: 10.1016/j.dsr2.2020.104760
L. Kuhnz, H.A. Ruhl, C.L. Huffard, K.L. Smith. (2020) Benthic megafauna assemblage change over three decades in the abyss: Variations from species to functional groups Deep-Sea Research II. 173: 104761. doi: 10.1016/j.dsr2.2020.104761 free from publisher
*Durden, J.M., B.J. Bett, C.L. Huffard, C. Pebody, H.A. Ruhl, K.L. Smith Jr. (2020) Response of deep-sea deposit-feeding rates to detrital inputs: a comparison of two abyssal time-series sites. Deep-Sea Research II 173: 104677. doi: 10.1016/j.dsr2.2019.104677
Smith, K.L. Jr., C.L. Huffard, P. McGill, A.D. Sherman, T. Connolly, S. von Thun, L. Kuhnz (2020). Gelatinous zooplankton abundance and benthic boundary layer currents in the abyssal Northeast Pacific: a 3-yr time series study. Deep-Sea Research II 173: 104654. doi: 10.1016/j.dsr2.2019.104654 free from publisher
*Morse, P., C.L. Huffard. (2019) Tactical Tentacles: New Insights on the Processes of Sexual Selection among the Cephalopoda. Frontiers in Physiology doi:10.3389/fphys.2019.01035 free from publisher
*Durden, J., B. Bett, C.L. Huffard, H.A. Ruhl, K.L. Smith Jr. (2019) Abyssal deposit feeding rates consistent with the Metabolic Theory of Ecology. Ecology 100(1):e102564
Smith, K.L. Jr., H.A. Ruhl, C.L. Huffard, M. Messié, M. Kahru. (2018) Episodic organic carbon fluxes from surface ocean to abyssal depths during long-term monitoring in NE Pacific. Proceedings of the National Academy of Sciences. 115 (48) 12235-12240 pdf free from publisher
*Morse, P., S.R. Kjeldsen, M.G. Meekan, M.I. McCormick, J.K. Finn, C.L. Huffard, K. R. Zenger (2018) Genome-wide comparisons reveal a clinal species pattern within a holobenthic octopod - the Australian Southern Blue-Ringed Octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Ecology and Evolution 8:2253–2267
*Morse, P., C.L. Huffard, M.G. Meekan, M.I. Mccormick, K.R. Zenger (2018) Mating behaviour and postcopulatory fertilization patterns in the southern blue-ringed octopus, Hapalochlaena maculosa. Animal Behaviour 136:41–351
Smith Jr., K.L., A.D. Sherman, P. R. McGill, R.G. Henthorn, J. Ferreira, C.L. Huffard. (2017) Evolution of monitoring an abyssal time-series station in the N.E. Pacific over 28 years. Oceanography
Fox, H.E., M.D. Barnes, G. Ahmadia, G. Kao, L. Glew, K. Haisfield, N.I. Hidayat, C.L. Huffard, L. Katz, S. Mangubhai, Purwanto (2017) Generating actionable data for evidence-based conservation in the global center of marine biodiversity. Biological Conservation 210:299–309
*Morse, P., K.R. Zenger, M.I. McCormick, M.G. Meekan, C.L. Huffard (2016) Chemical cues correlate with agonistic behaviour and female mate choice in the southern blue-ringed octopus, Hapalochlaena maculosa (Hoyle, 1883) (Cephalopoda: Octopodidae). Journal of Molluscan Studies doi:10.1093/mollus/eyw045 (9 pp)
McGill P.R., R.G. Henthorn, L.E. Bird, C.L. Huffard, D.V. Klimov, K.L. Smith, Jr. (2016) Sedimentation Event Sensor: new ocean instrument for in-situ imaging and fluorometry of sinking particulate matter. Limnology and Oceanography Methods 14(12):853–863
Dunlop, K.M., D. van Oevelen, H.A. Ruhl, C.L. Huffard, L.A. Kuhnz, K.L. Smith, Jr. (2016) Carbon cycling in the deep eastern North Pacific benthic food web: Investigating the effect of organic carbon input. Limnology and Oceanography 61: 1956–1968
Smith Jr., K.L, C.L. Huffard, A.D. Sherman, H.A. Ruhl (2016) Decadal change in sediment community oxygen consumption in the abyssal northeast Pacific. Aquatic Geochemistry 22:401–417
Huffard, C.L., L.A. Kuhnz, *L. Lemon, A.D. Sherman, K.L. Smith, Jr. (2016) Demographic indicators of change in a deposit-feeding abyssal holothurian community (Station M, 4000m). Deep-Sea Research I: Oceanographic Research Papers 109:27–39
*Morse, P., K.R. Zenger, M.I. McCormick, M.G. Meekan, C.L. Huffard (2015) Nocturnal mating behaviour and dynamic male investment of copulation time in the southern blue-ringed octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Behaviour 152(14):1883–1910
Smith, K.L. Jr., M. Messié, A.D. Sherman, C.L. Huffard, B.W. Hobson, H.A. Ruhl, A. Boetius (2015) Navigating the uncertain future of global oceanic time series. EOS 96, doi: 10.1029/2015EO038095
Caldwell, R.L., A. Ross, A. Rodaniche, C.L. Huffard (2015) Behavior and body patterns of the Larger Pacific Striped Octopus. Plos One doi: 10.1371/journal.pone.0134152 (17 pp)
*Rude, J., A. *Minks, B. *Doheny, M. *Tyner, K. *Maher, C.L. Huffard, N.I. Hudayat, H. Grantham (2015) Ridge to reef modeling for use within land-sea planning under data-poor conditions. Aquatic Conservation: Marine and Freshwater Ecosystems 26(2):251–264
*Laguionie-Marchais, C., L.A. Kuhnz, L.A., C.L. Huffard, H.A. Ruhl, K.L. Smith, Jr. (2015) Spatial and temporal variation in sponge spicule patches at Station M, North East Pacific. Marine Biology 162(3):617 – 624
Huffard, C.L., M. Bartick (2015) Wild Wunderpus photogenicus and Octopus cyanea employ asphyxiating ‘constricting’ in interactions with other octopuses. Molluscan Research 35(1):12–16
Kuhnz, L.A, H. A. Ruhl, C. L. Huffard, & K. L. Smith Jr. (2014) A benthic megafaunal community in the abyssal northeast
Pacific: structural changes over a 24-year time series. Progress in Oceanography doi.org/10.1016/j.pocean.2014.04.007
Smith Jr. K.L., A.D. Sherman, C.L. Huffard, P.R. McGill, R. Henthorn, S.Von Thun, H.A. Ruhl, M. Kahru, & M.D. Ohman
(2014). Large salp bloom export from the upper ocean and benthic community response in the abyssal northeast Pacific: day to week resolution.
Limnology and Oceanography. 59(3): 745-757. pdf free from publisher
Smith Jr., K.L., H.A. Ruhl, M. Kahru, C.L. Huffard, & A.D. Sherman. (2013) Deep ocean communities impacted by changing
climate over 24 years in the abyssal northeast Pacific Ocean. Proceedings of the National Academy of Sciences. doi:10.1073/pnas.1315447110 pdf free from publisher
Huffard, C.L. (2013, Invited review) Cephalopod biology: an introduction for biologists working in other model systems. Invertebrate Neuroscience DOI: 10.1007/s10158-013-0147-z
Mangubhai S., M.V. Erdmann, J.R. Wilson, C.L. Huffard et al. (2012) Papua Bird’s Head Seascape: emerging threats, challenges and opportunities in the global center of marine biodiversity Marine Pollution Bulletin pdf free from publisher
Bush, S.L., H.J.T. Hoving, C.L. Huffard, B.H. Robison & L.D. Zeidberg (2012) Brooding and sperm storage by the deep-sea squid Bathyteuthis berryi (Cephalopoda: Decapodiformes). Journal of the Marine Biological Association of the United Kingdom. DOI:10.1017/S0025315411002165
Williams, B.L., V. Lovenburg, C.L. Huffard, & R.L. Caldwell. (2011) Chemical defense in pelagic octopus paralarvae: Tetrodotoxin alone does not protect individual paralarvae of the greater blue-ringed octopus (Hapalochlaena lunulata) from common reef predators. Chemoecology. DOI 10.1007/s00049-011-0075-5
Huffard, C.L., N. Saarman, H. Hamilton, & B. Simison (2010) The evolution of conspicuous facultative mimicry in octopus: an example of secondary adaptation? Biological Journal of the Linnean Society 101(1):68–77
Huffard, C.L., R.L. Caldwell & F. Boneka (2010) Male-male and male-female aggression may influence mating associations in wild octopuses (Abdopus aculeatus). Journal of Comparative Psychology 124(1): 38–46
Huffard, C.L. & P. Godfrey-Smith (2010). Field observations of mating in Octopus tetricus Gould 1852 and Amphioctopus marginatus (Taki, 1964). Molluscan Research 30(2): 81-86 (cover photo in part)
Dimara, R., A. Fauzan, M. Lazuardi, D. Pada, G.R. Allen, M.V. Erdmann, C.L. Huffard, L.S. Katz, & R. Winterbottom. (2010) Pisces, Teleostei, Gobiidae, illustrated list of additions to the fauna of the Raja Ampat Islands, Indonesia. Checklist 6(4):619–625.
Huffard, C.L. B. Gentry, & D.W. Gentry. (2009). Description of the paralarvae of Wunderpus photogenicus Hochberg, Norman & Finn, 2006 (Cephalopoda: Octopodidae). Raffles Bulletin of Zoology 57(1): 109-112 pdf free from publisher
Huffard, C.L., R.L. Caldwell, N. DeLoach, D.W. Gentry, P. Humann, B. MacDonald, B. Moore, R. Ross, T. Uno, & S. Wong. (2008) Individually unique body color patterns in octopus (Wunderpus photogenicus) allow for photoidentification. PLoS ONE 3(11): e3732 pdf free from publisher
Huffard, C.L., R.L. Caldwell & F. Boneka. (2008) Mating behavior of Abdopus aculeatus (d’Orbigny 1834) (Cephalopoda: Octopodidae) in the wild. Marine Biology 154: 353-362
Huffard, C.L. (2007) Four new species of shallow water octopus from the Kingdom of Tonga. Molluscan Research 27(3): 147-170
Huffard, C.L. (2007) Ethogram of Abdopus aculeatus (d’Orbigny, 1834) (Cephalopoda: Octopodidae): can behavioral characters inform octopodid taxonomy and systematics? Journal of Molluscan Studies 73: 185-193 pdf free from publisher
Huffard, C.L. (2006) Locomotion by Abdopus aculeatus: walking the line between primary and secondary defenses. The Journal of Experimental Biology 209: 3697-3707 (cover photo) pdf free from publisher
Huffard, C.L., F. Boneka, & R.J. Full (2005) Underwater bipedal locomotion by octopuses in disguise. Science 307:1927
Huffard, C.L. & F.G. Hochberg (2005) Description of a new species of the genus Amphioctopus (Mollusca: Octopodidae) from the Hawai’ian islands. Molluscan Research 25(3):113-128
Huffard, C.L. (2005) The behavioral ecology and locomotion of Abdopus aculeatus (d'Orbigny 1834). Ph.D. Dissertation, University of California, Berkeley USA. 189 pp.
Huffard, C.L. & R.L. Caldwell (2002). Inking in a blue-ringed octopus, Hapalochlaena lunulata (Quoy & Giamard, 1832), with a vestigial ink sac. Pacific Science 56(3) pp. 255-257
Huffard C. L., C. A. Durkin, S. E. Wilson, P. McGill, Rich Henthorn, K. L. Smith Jr. (2020) Temporally-resolved mechanisms of deep-ocean particle flux and impact on the seafloor carbon cycle in the northeast Pacific. Deep-Sea Research II. 173: 104763. doi: 10.1016/j.dsr2.2020.104763 free from publisher
Shaw, T., C. Boucher, K.L. Smith Jr, C.L. Huffard. (2020) Model study of oxygen mass transfer into persistent aggregate layers in the deep sea Deep-Sea Research II. 173: 104760. doi: 10.1016/j.dsr2.2020.104760
L. Kuhnz, H.A. Ruhl, C.L. Huffard, K.L. Smith. (2020) Benthic megafauna assemblage change over three decades in the abyss: Variations from species to functional groups Deep-Sea Research II. 173: 104761. doi: 10.1016/j.dsr2.2020.104761 free from publisher
*Durden, J.M., B.J. Bett, C.L. Huffard, C. Pebody, H.A. Ruhl, K.L. Smith Jr. (2020) Response of deep-sea deposit-feeding rates to detrital inputs: a comparison of two abyssal time-series sites. Deep-Sea Research II 173: 104677. doi: 10.1016/j.dsr2.2019.104677
Smith, K.L. Jr., C.L. Huffard, P. McGill, A.D. Sherman, T. Connolly, S. von Thun, L. Kuhnz (2020). Gelatinous zooplankton abundance and benthic boundary layer currents in the abyssal Northeast Pacific: a 3-yr time series study. Deep-Sea Research II 173: 104654. doi: 10.1016/j.dsr2.2019.104654 free from publisher
*Morse, P., C.L. Huffard. (2019) Tactical Tentacles: New Insights on the Processes of Sexual Selection among the Cephalopoda. Frontiers in Physiology doi:10.3389/fphys.2019.01035 free from publisher
*Durden, J., B. Bett, C.L. Huffard, H.A. Ruhl, K.L. Smith Jr. (2019) Abyssal deposit feeding rates consistent with the Metabolic Theory of Ecology. Ecology 100(1):e102564
Smith, K.L. Jr., H.A. Ruhl, C.L. Huffard, M. Messié, M. Kahru. (2018) Episodic organic carbon fluxes from surface ocean to abyssal depths during long-term monitoring in NE Pacific. Proceedings of the National Academy of Sciences. 115 (48) 12235-12240 pdf free from publisher
*Morse, P., S.R. Kjeldsen, M.G. Meekan, M.I. McCormick, J.K. Finn, C.L. Huffard, K. R. Zenger (2018) Genome-wide comparisons reveal a clinal species pattern within a holobenthic octopod - the Australian Southern Blue-Ringed Octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Ecology and Evolution 8:2253–2267
*Morse, P., C.L. Huffard, M.G. Meekan, M.I. Mccormick, K.R. Zenger (2018) Mating behaviour and postcopulatory fertilization patterns in the southern blue-ringed octopus, Hapalochlaena maculosa. Animal Behaviour 136:41–351
Smith Jr., K.L., A.D. Sherman, P. R. McGill, R.G. Henthorn, J. Ferreira, C.L. Huffard. (2017) Evolution of monitoring an abyssal time-series station in the N.E. Pacific over 28 years. Oceanography
Fox, H.E., M.D. Barnes, G. Ahmadia, G. Kao, L. Glew, K. Haisfield, N.I. Hidayat, C.L. Huffard, L. Katz, S. Mangubhai, Purwanto (2017) Generating actionable data for evidence-based conservation in the global center of marine biodiversity. Biological Conservation 210:299–309
*Morse, P., K.R. Zenger, M.I. McCormick, M.G. Meekan, C.L. Huffard (2016) Chemical cues correlate with agonistic behaviour and female mate choice in the southern blue-ringed octopus, Hapalochlaena maculosa (Hoyle, 1883) (Cephalopoda: Octopodidae). Journal of Molluscan Studies doi:10.1093/mollus/eyw045 (9 pp)
McGill P.R., R.G. Henthorn, L.E. Bird, C.L. Huffard, D.V. Klimov, K.L. Smith, Jr. (2016) Sedimentation Event Sensor: new ocean instrument for in-situ imaging and fluorometry of sinking particulate matter. Limnology and Oceanography Methods 14(12):853–863
Dunlop, K.M., D. van Oevelen, H.A. Ruhl, C.L. Huffard, L.A. Kuhnz, K.L. Smith, Jr. (2016) Carbon cycling in the deep eastern North Pacific benthic food web: Investigating the effect of organic carbon input. Limnology and Oceanography 61: 1956–1968
Smith Jr., K.L, C.L. Huffard, A.D. Sherman, H.A. Ruhl (2016) Decadal change in sediment community oxygen consumption in the abyssal northeast Pacific. Aquatic Geochemistry 22:401–417
Huffard, C.L., L.A. Kuhnz, *L. Lemon, A.D. Sherman, K.L. Smith, Jr. (2016) Demographic indicators of change in a deposit-feeding abyssal holothurian community (Station M, 4000m). Deep-Sea Research I: Oceanographic Research Papers 109:27–39
*Morse, P., K.R. Zenger, M.I. McCormick, M.G. Meekan, C.L. Huffard (2015) Nocturnal mating behaviour and dynamic male investment of copulation time in the southern blue-ringed octopus, Hapalochlaena maculosa (Cephalopoda: Octopodidae). Behaviour 152(14):1883–1910
Smith, K.L. Jr., M. Messié, A.D. Sherman, C.L. Huffard, B.W. Hobson, H.A. Ruhl, A. Boetius (2015) Navigating the uncertain future of global oceanic time series. EOS 96, doi: 10.1029/2015EO038095
Caldwell, R.L., A. Ross, A. Rodaniche, C.L. Huffard (2015) Behavior and body patterns of the Larger Pacific Striped Octopus. Plos One doi: 10.1371/journal.pone.0134152 (17 pp)
*Rude, J., A. *Minks, B. *Doheny, M. *Tyner, K. *Maher, C.L. Huffard, N.I. Hudayat, H. Grantham (2015) Ridge to reef modeling for use within land-sea planning under data-poor conditions. Aquatic Conservation: Marine and Freshwater Ecosystems 26(2):251–264
*Laguionie-Marchais, C., L.A. Kuhnz, L.A., C.L. Huffard, H.A. Ruhl, K.L. Smith, Jr. (2015) Spatial and temporal variation in sponge spicule patches at Station M, North East Pacific. Marine Biology 162(3):617 – 624
Huffard, C.L., M. Bartick (2015) Wild Wunderpus photogenicus and Octopus cyanea employ asphyxiating ‘constricting’ in interactions with other octopuses. Molluscan Research 35(1):12–16
Kuhnz, L.A, H. A. Ruhl, C. L. Huffard, & K. L. Smith Jr. (2014) A benthic megafaunal community in the abyssal northeast
Pacific: structural changes over a 24-year time series. Progress in Oceanography doi.org/10.1016/j.pocean.2014.04.007
Smith Jr. K.L., A.D. Sherman, C.L. Huffard, P.R. McGill, R. Henthorn, S.Von Thun, H.A. Ruhl, M. Kahru, & M.D. Ohman
(2014). Large salp bloom export from the upper ocean and benthic community response in the abyssal northeast Pacific: day to week resolution.
Limnology and Oceanography. 59(3): 745-757. pdf free from publisher
Smith Jr., K.L., H.A. Ruhl, M. Kahru, C.L. Huffard, & A.D. Sherman. (2013) Deep ocean communities impacted by changing
climate over 24 years in the abyssal northeast Pacific Ocean. Proceedings of the National Academy of Sciences. doi:10.1073/pnas.1315447110 pdf free from publisher
Huffard, C.L. (2013, Invited review) Cephalopod biology: an introduction for biologists working in other model systems. Invertebrate Neuroscience DOI: 10.1007/s10158-013-0147-z
Mangubhai S., M.V. Erdmann, J.R. Wilson, C.L. Huffard et al. (2012) Papua Bird’s Head Seascape: emerging threats, challenges and opportunities in the global center of marine biodiversity Marine Pollution Bulletin pdf free from publisher
Bush, S.L., H.J.T. Hoving, C.L. Huffard, B.H. Robison & L.D. Zeidberg (2012) Brooding and sperm storage by the deep-sea squid Bathyteuthis berryi (Cephalopoda: Decapodiformes). Journal of the Marine Biological Association of the United Kingdom. DOI:10.1017/S0025315411002165
Williams, B.L., V. Lovenburg, C.L. Huffard, & R.L. Caldwell. (2011) Chemical defense in pelagic octopus paralarvae: Tetrodotoxin alone does not protect individual paralarvae of the greater blue-ringed octopus (Hapalochlaena lunulata) from common reef predators. Chemoecology. DOI 10.1007/s00049-011-0075-5
Huffard, C.L., N. Saarman, H. Hamilton, & B. Simison (2010) The evolution of conspicuous facultative mimicry in octopus: an example of secondary adaptation? Biological Journal of the Linnean Society 101(1):68–77
Huffard, C.L., R.L. Caldwell & F. Boneka (2010) Male-male and male-female aggression may influence mating associations in wild octopuses (Abdopus aculeatus). Journal of Comparative Psychology 124(1): 38–46
Huffard, C.L. & P. Godfrey-Smith (2010). Field observations of mating in Octopus tetricus Gould 1852 and Amphioctopus marginatus (Taki, 1964). Molluscan Research 30(2): 81-86 (cover photo in part)
Dimara, R., A. Fauzan, M. Lazuardi, D. Pada, G.R. Allen, M.V. Erdmann, C.L. Huffard, L.S. Katz, & R. Winterbottom. (2010) Pisces, Teleostei, Gobiidae, illustrated list of additions to the fauna of the Raja Ampat Islands, Indonesia. Checklist 6(4):619–625.
Huffard, C.L. B. Gentry, & D.W. Gentry. (2009). Description of the paralarvae of Wunderpus photogenicus Hochberg, Norman & Finn, 2006 (Cephalopoda: Octopodidae). Raffles Bulletin of Zoology 57(1): 109-112 pdf free from publisher
Huffard, C.L., R.L. Caldwell, N. DeLoach, D.W. Gentry, P. Humann, B. MacDonald, B. Moore, R. Ross, T. Uno, & S. Wong. (2008) Individually unique body color patterns in octopus (Wunderpus photogenicus) allow for photoidentification. PLoS ONE 3(11): e3732 pdf free from publisher
Huffard, C.L., R.L. Caldwell & F. Boneka. (2008) Mating behavior of Abdopus aculeatus (d’Orbigny 1834) (Cephalopoda: Octopodidae) in the wild. Marine Biology 154: 353-362
Huffard, C.L. (2007) Four new species of shallow water octopus from the Kingdom of Tonga. Molluscan Research 27(3): 147-170
Huffard, C.L. (2007) Ethogram of Abdopus aculeatus (d’Orbigny, 1834) (Cephalopoda: Octopodidae): can behavioral characters inform octopodid taxonomy and systematics? Journal of Molluscan Studies 73: 185-193 pdf free from publisher
Huffard, C.L. (2006) Locomotion by Abdopus aculeatus: walking the line between primary and secondary defenses. The Journal of Experimental Biology 209: 3697-3707 (cover photo) pdf free from publisher
Huffard, C.L., F. Boneka, & R.J. Full (2005) Underwater bipedal locomotion by octopuses in disguise. Science 307:1927
Huffard, C.L. & F.G. Hochberg (2005) Description of a new species of the genus Amphioctopus (Mollusca: Octopodidae) from the Hawai’ian islands. Molluscan Research 25(3):113-128
Huffard, C.L. (2005) The behavioral ecology and locomotion of Abdopus aculeatus (d'Orbigny 1834). Ph.D. Dissertation, University of California, Berkeley USA. 189 pp.
Huffard, C.L. & R.L. Caldwell (2002). Inking in a blue-ringed octopus, Hapalochlaena lunulata (Quoy & Giamard, 1832), with a vestigial ink sac. Pacific Science 56(3) pp. 255-257